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… as a mutualist, where both species of organism benefit from association, but was predicted to have evolved from a parasitic interaction with their soil fungus host, … with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC 52813) as …

… began in 2014, pairs undergraduate and graduate students from UC Merced with at least one JGI mentor. Together, they …

… recently compiled a list of with more than 8,300 organisms from multiple sources, including the U.S. Department of … ruminant guts, sediments, and anaerobic bioreactors. Aside from producing energy that the organisms can use to thrive, … a list of prokaryotes with fermentative metabolism from the literature. They then used the JGI’s GOLD and IMG …

… CRAGE allows for the transplanting of these BGCs from one organism into an alternate host via a landing pad … to rapidly confirm enhanced production of 22 metabolites from six biosynthetic gene clusters. One of those was a metabolite from a previously uncharacterized biosynthetic gene cluster. …

… California (UC), Merced assistant professor Suzanne Sindi from the School of Natural Sciences and started a program … Arroyo lauded the partnership. Sindi also shared a message from Betsy Dumont , Dean of the UC Merced School of Natural … Huerta (2015 undergraduate intern): Just graduated from UC Merced and starting the Helena O. Mishoe …

… in developing new methods to improve genome recovery from single cells and to build sequencing libraries from minimal DNA input without amplification. …

… During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI … two interns returned to re-engage with their mentors from the previous year and continue working on their …

… a template — integrative analysis of multiple omics data from various environments — that JGI users can leverage to … the increased salinity caused the cell to consume phosphate from its environment more quickly than usual. In addition, … The team also identified previously unknown promoter sequences within these gene clusters, offering new …