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… with excitement and determination as they came onsite. From data carpentry to science communications, their … this short video (below) to hear more about the summer from their own perspectives. The interns from this cohort … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and …

… JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of … experience and beginning work on the download experience from MycoCosm and PhycoCosm, with the intent of eventually …

… processes for the first time. By collecting data from 27 different poplar ( Populus trichocarpa ) trees, as … Summary The 27 samples studied by researchers came from two environments: natural forests and plantations … From our partners …

… all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … time. They also discovered more than 6,000 mitochondrial sequences previously unrecognized within existing public … barriers for researchers who previously lacked access to high-quality mitochondrial annotations. Summary …

… and Data Collaboration Center (CODCC), is led by a team of highly experienced investigators from institutions including the University of Maryland and … collection of UViGs by identifying contiguous viral sequences (“contigs”) from thousands of ecologically diverse …

… user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 metagenome-assembled genomes (MAGs) … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that …

… the University of California, Riverside and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome … fungi, given that the intricate flagellar apparatus is highly unlikely to regain once it is lost. Depending on the … of binning methods, we were able to recover Olpidium sequences from the “contaminated” genome data with strong …

… And so we’re looking at the overall greenhouse gas impacts from all of our operations,” said Brie Fulton, program … Reaching that goal will mean slashing direct emissions from energy, natural gas and electricity, as well as … and performing services,” Fulton said. These emissions come from the whole lifecycle of materials used — from their …

… From left to right: [above] Olivia Ahern, Adriana Corales, …

… for Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … cell (seen here in a glass capillary), researchers sequenced and assembled the first complete genome of an …

… as a reservoir for carbon compounds that plants generate from carbon dioxide they take in. In this way, encouraging … this symbiosis could improve the way soils store carbon from the atmosphere. For plants, boosting this relationship … spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because this …

… of Florida collected forest samples of poplar and soil from Washington and Oregon. The cuttings included genotypes from the DOE BioEnergy Science Center (BESC), predecessor … in order to get  M. elongata and  I. europaea  genomes sequenced and annotated for this study. The team found that, …