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… 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy (DOE) … diversity of the fungal kingdom. The abundance of fungal genomes underscores the need for a more comprehensive …

Genomes from uncultivated bacteria offers clues to ancestral … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria … Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed Margulisbacteria, and had found they …

New genomes highlight the diversity of white rot fungi in the … around the world. By complete sequencing of 24 new mushroom genomes, and assembling genomes from 60 existing sequences, this work expands the …

… plant host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with genomes from other plant-associated fungi. Their analysis … gaps on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome …

… that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … technologies and bioinformatic tools have helped decode the genomes of tens of thousands of previously unknown and … bioinformatics tools for  extracting snippets of microbial genomes directly from environmental sequence data, by …

… developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their ancestors. The method was tested on a number of plants, including  genomes of cotton lineages and the  oilseed crop false flax …

… for the design and maintenance of the Integrated Microbial Genomes (IMG) data warehouse, and integration of genomic and …

Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. Along … the world, finding over 125,000 partial and complete viral genomes. That study multiplied the number of known viral … year, the JGI expanded its existing Integrated Microbial Genomes & Microbiomes database to include a dedicated …

… the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed …