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A Sorghum Pangenome Opens More Doors to Discovery
… and bioenergy production. Together with resequencing of 1,984 cultivars and landraces, these data capture the … team looked at a gene that traces domestication, SHATTERING1 . This gene controls whether a plant keeps its seeds … improves global crop trait discovery.  Nature (2026). doi:10.1038/s41586-026-10229-9   …
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A User-Centered Approach to Accessing JGI Data
… metadata’ across the files that are submitted by each scientific program,” he said. “If each kingdom submits the … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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JGIota: A Biofuel Breakthrough in Anaerobic Fungi with Michelle O'Malley and Tom Lankiewicz
… anaerobic fungi, as well as a recent discovery that turns scientific presumption on its head and opens up a new avenue …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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How Filamentous Fungi Sense Food
… tree of life, enriching the work being done as part of the 1000 Fungal Genomes Project. Funding for the project was … the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of a Model Filamentous … under US Department of Energy Contract DE-AC02-05CH11231, a Joint Genome Institute Community Science Program …
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Len Pennacchio
… at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University … mouse models for this common neurological disorder. In 1999, he was named a DOE Alexander Hollaender Distinguished … Berkeley Laboratory Director’s Award for Exceptional Scientific Achievement 2017-  Adjunct Professor UC-Berkeley …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in … for investigating plant-microbe interactions. A final recent advance in CRAGE is the addition of CRISPR …
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2024 Progress Report
… 2,456 — had active proposals with us, along with more than 15,000 secondary users who made use of our data. We completed 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA … processed 13,700 metabolomics samples With our users, 247 publications were published   …
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Game On: High School Students Drive Everglades Metagenomics Study
… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … as a class, the students learned about how to write a scientific paper. They wrote, edited, and rewrote a … to the journal  Environmental Microbiome with significant scientific observations for this Everglades area. Their …
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JGI@25: Studying Sorghum’s Survival Skills
… and thrive — some varieties grow their leafy stalks 16 to 18 feet into the air. Beyond being a staple grain eaten … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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JGI announces first round of 2023 New Investigator awardees
… Community Science Program.  Below find a list of the first 10 researchers accepted for 2023. Proposals are accepted … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Annual Genomics of Energy & Environment Meeting
… on a competitive, peer-reviewed basis to the worldwide scientific community can advance your research goals. …
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