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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental … Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has been developed to help inform scientists and researchers more about the patterns and …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in … bacterium's entire metabolism for chemical production, the study provides a blueprint that engineers can use to design …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have … (affectionately known as “Chlamy” to those who study it) a powerful reference organism for studying … Computational Biology Program, along with JGI Computational Scientist Simon Prochnik, Arthur Grossman of the Carnegie …
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A Natural Mechanism Can Turbocharge Viral Evolution
… Understanding how a fundamental mechanism of evolution allows microbes … The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … the dice. There’s some evidence to support the idea. Study coauthor Stephen Nayfach, a JGI bioinformatics …
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Matt Blow
… Dr. Blow joined the JGI in 2009, and currently heads the Genome … he worked on computational and experimental approaches to study genome regulation in human and other vertebrate … genomes. When he joined the JGI, he worked as a project scientist and then as a research scientist on projects to …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: … is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) data and workflows …
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Natural Prodcast Episode 22: Alison Narayan
… Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society … of them to be highly related to enzymes that we have been studying since day one in my lab that do oxidative … one of also the amazing things that we learned through this study is that our predicted ancestral proteins are much more …
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A detailed gene expression study of the Miscanthusgenus reveals changes in the transcriptome associated with the rejuvenation of spring rhizomes
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The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies
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