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… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  recently described in  Nature Biotechnology  called geNomad identifies and … viral diversity. geNomad has already been downloaded thousands of times, receiving excellent feedback from the …

… Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first step in the deadly dance between a virus and microbial cell is an … (DP150100244) and the Australian Antarctic Science program (project 4031). The work in the Hallam Lab was performed …

… Machine learning methods were applied on sequenced fungal … data generated in part through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact … the fungal Tree of Life, including the 1000 Fungal Genomes Project, which aims to provide a reference genome for each …

… Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … crops because it leads to reduced harvest yields. Over thousands of years, farmers have selected for cereal plants … JGI group has been wonderful to collaborate with, and this [project] wouldn’t have been possible without their …

… Committee (UEC) of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User … environments. He’s been involved in several plant genome projects through the Community Science Program. As a UEC … to encourage more plant proposals and provide feedback on pangenome tool development. Maurice is a fungal evolutionary …

… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The … these genes has helped pave the way for the conception of a pangenome. Recordings and recaps of all three keynote talks … to know at the beginning of my career, with my postdoctoral project beginning with her strains,” Wessler explained. “She …

… warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the … biological oceanographer at the University of California, San Diego and the Scripps Institution of Oceanography, who was … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for … CLOSED Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of … user facilities Investigators with DOE mission-relevant projects that call for expansive sequencing, synthetic …

… species unique and different from one another. They are incredibly important to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities for — secondary …

… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics … your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are incorrect or need to be changed, … the resources for free. 8.  Q: What makes a successful project? A: Combination of: DOE mission relevance Science …

… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a … have given the researchers glimpses of the population and pangenome variations in the eucalyptus species. The researchers are already working toward a eucalyptus pangenome to better understand the genetic structural …

… Uncovering associations between plant roots and fungi that can help … on the fungal Tree of Life through the 1000 Fungal Genomes Project. Hacquard’s group had assembled a mycobiome culture … is an “excellent example” of how a 1000 Fungal Genomes project can enable studies of plant root microbiome and …