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An Earth Month Look at Sustainability Efforts at the JGI
… a specific push going on at the JGI — the ZERO Waste Initiative — that works to prepare the IGB to be the first … of landfill waste is diverted to compost or recycling. That initiative is the result of a partnership with Sustainable … trash. Last year, in Berkeley, the now IGB-wide ZERO Waste Initiative began its most ambitious project yet: a special …
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Enlarging Windows into Understanding Gene Functions
… four letters represents an organism’s genetic code, or genome, which underlies physical features and functions. … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … proposal through the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… the JGI is sequencing thousands of bacterial and archaeal genomes from diverse branches of the Tree of Life.  Its … Huntemann, Nikos Kyrpides  and Simon Roux — features 600 genome sequences for Actinobacteria.  Woyke  was also one of … soil health. He also contributed to an update of  the JGI’s Genome OnLine Database (GOLD ) database that also marked the …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha … Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, … keep updating the Gene Atlas with curated datasets from CSP projects and aim to improve plant gene function …
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A More Intuitive Phytozome Interface
… version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … website. Since May 2019, v12 has not had any additional genomes added to it, nor had any feature updates. Phytozome  v13, which now hosts upwards of 250 plant genomes and has been under active development for over 5 …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
… Genomics portal of the Department of Energy Joint Genome Institute, and facilitates accurate and insightful …
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Three Join the JGI User Executive Committee
… on review panels for the JGI Community Science Program (CSP) proposals. He  brings experience representative of the … to her early career success, and is currently a PI for both CSP New Investigator and large-scale CSP projects. Wilbanks has served on review panels for the …
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Gut Fungi: Unexpected Source of Novel Chemicals
… called natural products . Yet, combing through the genomes of four anaerobic fungal species has revealed, for … and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department of Energy … Integrating Collaborations for User Science (FICUS) initiative, which allows researchers to more easily …
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Understanding Wildfire Recovery, Starting in Soil
… to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as proteobacteria, … Integrating Collaborations for User Science (FICUS) initiative . In this program, researchers leverage the …
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2025 Progress Report
… Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… of sequence. “We are thrilled to support this year’s CSP awardees as they embark on ambitious projects that span … research community. See below for the full list of 2026 CSP Large Scale Call recipients.    …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), … our efforts in workforce development. We have a number of initiatives across several different campuses with this …
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