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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… more than 10 papers, including two Nature Plants publications, in five years, have come out of the … Science program developed thousands of DNA constructs encoding a molecular tool to repress targeted genes in the … fostering academia-industry collaborations.” A third story from the issue — Machine learning-based prediction of …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Stories Behind the Science: Decoding the Genes of Unseen Communities … From our partners …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers … in the SEED Scholars @ LBNL program,  with support from  the SEED program at UC Berkeley. Sally Liao came in … at the Joint Genome Institute, they interacted with interns from other programs and participated in onsite enrichment …
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Year in Review: JGI’s 2018 Progress Report Available Now
… Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , … Copies are available online – click here to go download one from the archive of JGI Progress Reports. Print copies will …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305T), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended
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Evolution of a Fungal Gene Expression Regulator
… Impact Interactions between plants and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a protein identified from their studied system results in seeing their predicted … from some of the top ecosystem-differentiating protein-coding annotations in all IMG metagenomes. The work is of …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. … that the process of moving 250 people and their equipment from 4 single-story buildings to a new 4-story building 20 …
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Adopt-A-Genome
… papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… genomic information using minute quantities of DNA derived from individual environmental cells. The proof of principle … team reported the first closed and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the microbes found in the oil plume from Deepwater …
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