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The Megadata of Lake Mendota – Part 3: Boating Out to David Buoy
This is the third and final episode of our series on a giant metagenome assembly from Wisconsin’s Lake … the specialized software and supercomputers behind this project. But every part of this project depends on lakewater samples — so this episode is a …
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A Collaboration to Improve Plant Genome Annotations Across Species
Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … course data from two ecotypes of  Panicum hallii and multiple switchgrass ( Panicum virgatum ) experimental data. …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … between 3-12 consecutive months. Their proposed research projects address scientific challenges central to Office of … and this is a remarkable opportunity to launch a pilot project and begin the work of understanding how engineered …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… deep subsurface ecosystem. The Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are abundant … (Nachwuchs-gruppe “Dr. Alexander Probst”), and the NOVAC project of the German Science Foundation (grant number DFG …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation … China (No. 92251302, 91951205, and 31970122). Part of this project was supported by a Natural Sciences and Engineering …
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JGI-UC Merced Interns Share Their 2021 Experiences
… virtually with JGI mentors to investigate rigorous research projects, hone science presentation skills, and participate in … the previous year and continue working on their research project! The JGI-UC Merced internship program was founded in …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … keeps its DNA more organized. “The big surprise of the project was to realize that these genome copies that are … and advances microbial research.” One Giant Bacterium, Multiple Research Questions For the team, characterizing Ca. …
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A Complex Confection Decoded: Sugarcane Reference Genome
… work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, … Many plants, sugarcane included, are polyploid and have multiple copies of chromosomes. Sugarcane accounts for 80% of … of Experimental Botany (IEB) was supported by the ERDF project “Plants as a Tool for Sustainable Global …
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JGI announces 2024 Functional Genomics awardees
… year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and … in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity for …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the … after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human … of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood …
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The SlZRT1 Gene Encodes a Plasma Membrane-Located ZIP (Zrt-, Irt-Like Protein) Transporter in the Ectomycorrhizal Fungus Suillus luteus
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Isolation of Histone from Sorghum Leaf Tissue for Top Down Mass Spectrometry Profiling of Potential Epigenetic Markers.
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