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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues … and nitrogen exchange between the lichen partners. This genomic and transcriptomic analysis has opened the door for …
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Hiroshi Otani
… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … BS, Engineering, Tokyo Institute of Technology Master's, Biotechnology, University of Tokyo PhD, Biotechnology, University of Tokyo … Otani H, Udwary DW, Mouncey NJ. Comparative and pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … Q: Has there been any interest in using JBrowse / JB2  for genomic views ( e.g.,: … ( https://jgi.doe.gov/our-science/science-programs/fungal-genomics/ ). You can also contact us for additional details. …
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JGI announces 2025 Functional Genomics awardees
… Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from scientists who translate genomic information into biological function. Through our  …
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A Model System for Perennial Grasses
… Panicum hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study drought tolerance in perennial … the culmination of nearly a decade of work to develop genomic resources for drought tolerance in perennial …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific … community as a user facility pioneering functional genomics to solve the most relevant bioenergy and environmental problems.  The mission of the National Energy Research Scientific Computing Center …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our …
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2024 Progress Report
… The Integrative Genomics Building (IGB) seen above is home to the DOE Joint … Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … greater bioeconomy. By bringing together publicly available genomic data on algae into one place, PhycoCosm allows users … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from reseachers who translate genomic information into biological function. Through our …
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JGI & KBase at PAG XXVII
… how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January … on DOE Biological and Environmental Research (BER) Plant Genomic Science on current and ongoing developments toward …
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