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JGI@25: Fueling Investigation into Methane-Making Microbes
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making … 2010, the JGI has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through …
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A near complete snapshot of the Zea mays seedling transcriptome revealed from ultra-deep sequencing
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Draft genome sequence of Halomonas lutea strain YIM 91125T (DSM 23508T) isolated from the alkaline Lake Ebinur in Northwest China
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I-Min (Amy) Chen
… one of the co-authors and key developers of the Object-Protocol Model (OPM) data management tools for scientific applications developed at Berkeley Lab. Dr. Chen is … of Application Development Systems at Gene Logic, Inc. from 1997 to 2005, responsible for the development of key …
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Advancements in the application of NanoSIMS and Raman microspectroscopy to investigate the activity of microbial cells in soils
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for … 21, 2020, will be included in the next review. Q&A from the Webinar: Q(uestion): Can people can mix and match … institution, as there are some that won’t allow this. It’s really important to show that your team has the necessary …
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A Natural Mechanism Can Turbocharge Viral Evolution
… how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The first … harness them as molecular tools for research and industry applications. Summary In their recently published Nature … and viral genomes, as well as genomes sampled all at once from the same environment, called metagenomes. Why? Simon …
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Cataloging the Microbes that Manage the Health of River Systems
… researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … United States. They also provided multiple access points to the information. The team harnessed a community-science … and Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support by US …
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Microbiome Data Science Team
… discoveries and catalyzing a major transition of biology into data science.  Research in the Kyrpides group focuses on … discovery of new genes with important biotechnological applications (e.g., new CRISPR-Cas variants and new … Molecular Cell 2019) and massive reconstruction of genomes from uncultivated microbes (Nature 2019). Other projects in …
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Comparative Genomic Analysis of the Endosymbionts of Herbivorous Insects Reveals Eco-Environmental Adaptations: Biotechnology Applications
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Extensions of BLUP Models for Genomic Prediction in Heterogeneous Populations: Application in a Diverse Switchgrass Sample
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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction Protocols: … Tips …
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