Results

Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Uncovering Novel Genomes from Earth’s Microbiomes
… than 200 scientists, researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … microbes.” Teams of researchers worked on multiple analyses harnessing the genome repository, and the IMG/M … of projects.” The work also used resources of the  National Energy Research Scientific Computing Center (NERSC) , …
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Natural Prodcast Episode 24: Jackie Winter and SMC
… tool called emeraldBGC along with some other domain analyses like NCBI CD-Search, and InterProScan. And all of …
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Natural Prodcast Episode 5: Brad Moore
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Prodcast, a podcast produced by the US Department of Energy Joint Genome Institute, a DOE Office of Science User …
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Genome‐wide association studies and expression‐based quantitative trait loci analyses reveal roles of HCT2 in caffeoylquinic acid biosynthesis and its regulation by defense‐responsive transcription factors in Populus
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Team Science Reveals Important Protein in Poplar
… Knockout experiments showcase potential for engineering bioenergy crops The Science Scientists at Brookhaven National … one of the  Flagship Plants for the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … were less resistant to disease compared to the controls.  Analyses to understand how the protein influences poplar …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
… The team was led by researchers at two U.S. Department of Energy national user facilities – the DOE Joint Genome … from urine while also potentially reducing the typical energy production costs associated. They focused on … an osteoyeast. Foundry researchers then performed imaging analyses, using several microscopy techniques to confirm …
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SIPs with Standards
… generate SIP data that can be useful to multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli …
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Whole Genome Analyses Suggests that Burkholderia sensu lato Contains Two Additional Novel Genera (Mycetohabitans gen. nov., and Trinickia gen. nov.): Implications for the Evolution of Diazotrophy and Nodulation in the Burkholderiaceae
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New and Improved: Eucalyptus Reference is Now Accessible
… allows for more accurate and detailed comparative genomic analyses.   The Impact There are 900 species of eucalyptus. … work contributes to the efforts of the  U.S. Department of Energy (DOE) Office of Science Biological and Environmental … program to provide the fundamental science to support bioenergy innovations and contribute to the bioeconomy. Summary …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Riverside and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of … receive unanimous support from different analysis. Most analyses strongly supported Olpidium as the closest relative … of the early terrestrial fungal lineages. Our analyses estimate these diversification events occurred …
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