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… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … analysis, creation of large metabolite databases by running 1000s of metabolite standards, and development of … 1. Swift CL, Louie KB, Bowen BP, Olson HM, Purvine SO, …
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… library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). … Education …
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… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … Education …
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… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … ecogenomics. For this role, Dr. Roux can rely on more than 10 years of expertise in the fields of virus ecology and … virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, Dr. Roux established …
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… over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal geomics and PhycoCosm … by anaerobic fungi. Nature Microbiol. 8(4):596-610. Nelson et al (2022) Wildfire-dependent changes in soil … microbiome diversity and function. Nature Microbiol. 7(9):1419-1430. Ye et al (2022) The role of zinc in the adaptive …
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… has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of … Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β-Linked GlcNAc … R&D100 Award finalist 2019 SIMB Young Investigator Award 2013 …
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… Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. … of the arbuscular mycorrhizal symbiosis. Nature Plants 10, 673–688 Vyshenska et al. 2023. A standardized …
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… (IMG). He became the Metagenomics Program head in 2010 and has the combined Microbial Genomes and Metagenomes Program since 2011. Prior to joining the DOE Joint Genome Institute, Dr. … RNA virome reveals diverse clades of bacteriophages. Cell . 185(21):4023-4037 Nayfach S, et al. (2021) Metagenomic …
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… group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar joined the faculty of University of … 2018 Marthella Foskett Brown Chair, Computational Biology, UC Berkeley 2012 Cotton Biotechnology Award, National Cotton Council 2009 …
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… She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de … and reverse genetics to test those hypotheses. From 2011 – 2015, she worked with Sabeeha Merchant at UCLA as a NIH … Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s Recognition Award for Science, 2020 …
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… Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in Ensifer … Nitrogen-Fixing Symbiosis with Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and … Education …
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… Frederik Schulz joined the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His … metagenomics. Nature Reviews Microbiology 20: 721 Volland, J.-M. et al. 2022. A centimeter-long bacterium at the interface of simple and complex life. Science . 376: 1453-1458 Nayfach et al. (2021) A genomic catalog of Earth’s …
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