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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes … a team led by scientists at the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at Lawrence …
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JGI & KBase at PAG XXVII
XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems … and Transcriptomic Analyses for Bioprospecting in the Green Lineage using KBase 6:51 PM Evolution of Sex …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … crust, there is a vast ecosystem connected to the global carbon cycle. Archaea are key players in this deep … generated by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … study? How many samples are typically involved? How long does it take to do all the analyses? A:  For the JGI  New … typically use a measure of biomass, e.g. wet weight, total carbon analysis of the biomass, etc. Q:  If we have only the …
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Kjiersten Fagnan
Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … biology and bioinformatics approaches in support of meeting DOE mission critical programmatic goals. … Joubert et al., …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … Collecting and analyzing these samples was a global collaboration that brought together 39 researchers from … Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Congratulations to Jane Grimwood, who has been appointed the Loretta Purdy Spencer Chair in Genomics at the … Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after the JGI was … and the JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
Accepted proposals emphasize JGI interests in algae and secondary metabolites. A total of 27 … Program (CSP) call of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science … now a facet of the  Fungal & Algal Program . For example, green algae represent the largest group of primary producers …
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Effects of Polar Light Cycle on Microbial Food Web
… change with the seasons. The Science Light-harvesting bacteria (phototrophs) in Antarctica’s Ace Lake defy the … long ago, this shift to archaea being the main producer doesn’t occur here. Understanding this fundamental … there is a strong chemical and salinity gradient — and green sulfur bacteria,  Chlorobium , blooms. The specific …
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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome … He holds joint appointments as a Deputy Director at the DOE Joint Genome Institute, Senior Scientist at Lawrence … Mammalian Functional Genomics Lab VISTA Enhancers VISTA Cardiac Enhancer Browser ENCODE FaceBase … 2021-  NLM Board …
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A Plantiful Future: Xiaohan Yang
Can plants help humans attain a renewable energy future? Can they help lock away more carbon? Xiaohan Yang, a scientist at Oak Ridge National … Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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Nick Everson
Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI … after serving as the Chief Operating Officer of the DOE Joint Bioenergy Institute and the Operations Deputy for … resource and provides advice and counsel regarding current DOE, national laboratory, and UC policies and procedures …
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