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A User-Centered Approach to Accessing JGI Data
… When the JGI Data Portal (https://data.jgi.doe.gov/) launched last … Users were previously limited to accessing data sets within groups, such as plants (via Phytozome) or fungi ( … across the files that are submitted by each scientific program,” he said. “If each kingdom submits the same …
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Webinar: SIP technologies at EMSL and JGI
… Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a variety of tools that leverage … EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, NanoSIMS, … We estimate the overall atom enrichment within the bulk community DNA, and that gives us a rough estimate of whether …
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Nigel Mouncey
… a long-standing interest in microbial genetics that started with his education and carried forward into his roles as a … and Bioprocessing R&D Director and Leader at Dow AgroSciences in Indianapolis. During his time in industry, Dr. … and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility.  …
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JGI at the AGU Fall Meeting
… This year the AGU Fall Meeting, with the theme “Science is Society,” hosts sessions in New Orleans and … research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number … biofuels thanks to its drought and flood hardiness. Even with little water, full sunlight and hot temperatures, … original reference genome, the JGI has also continued to collaborate on research to understand how sorghum fares so …
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JGI Hosts GPU Hackathon in May
… WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit … genomics data and has a strong reputation in the community,” said JGI Chief Informatics Officer Kjiersten …
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Ten Pressing Questions (and Answers) About Marine Fungi and Opportunities for Collaborations in the Ocean Sciences
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Natural Prodcast
… chat”-style podcast about natural products and the science and scientists of secondary metabolism. Natural … to medicine, the environment, and human health. As the JGI acts on its goals in — and builds out its capabilities … as an important line of communication to the scientific community. Host Dan Udwary talks to luminaries in the field …
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JGI Workshops at PAG
… Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen interest in the … field and bring it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In … we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from …
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Four Researchers Join JGI User Executive Committee
… both as a liaison and advisory body, providing input on JGI policies and practices that support its user community. The breadth of scientific expertise of both the … He studies fungal biodiversity, ecology, and evolution, with a focus on microbiome sciences and fungal symbioses. He …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a … case studies, JGI scientific users share how they’ve worked with the JGI DNA Synthesis Science Program, which started in … expression system. Developed through the JGI DNA synthesis Community Science Program (CSP) Functional Genomics, the …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, … the JGI in 2016, and in 2018 was hired to be the JGI’s Data Science and Informatics department head.  Dr. Fagnan is also … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about …
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