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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes … and researchers to harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and flood resilience, biomass production for fuels, and growth in poor soils. In …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid … keynote speeches from Nobel Laureate Jennifer Doudna of the University of California, Berkeley and Berkeley Lab, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Learning to Look
… “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters may be … glasses, or a cane, but only Waldo will have all of these features. As described July 22, 2019, in  Nature … , a team led by scientists at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … do they adapt by changing what macromolecules are in their biomass, because that affects the quality of the food of … in how general environmental stressors, um, alter microbial biomass and then what the consequences are for the …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Hugh Cross; [Below] Zac Freedman, Martin Jonikas, Lotus Lofgren, Fumito Maruyama, Lauren Stadler, Tingting Xiang and … environments to engineered microbiomes that accelerate biomass processing. This year’s portfolio also includes a … the research consortium aims to generate over a terabase of sequence. “We are thrilled to support this year’s CSP …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… (CSP) . This includes mass spectrometry-based measurements of primary and secondary metabolites from plants, … cell counts or biovolume? A: We typically use a measure of biomass, e.g. wet weight, total carbon analysis of the biomass, etc. Q:  If we have only the metabolomics data …
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Computationally Classifying Fungal Lifestyles
… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the ecology … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in biomass each year to do so. As such, they are considered to …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … and Tanja Woyke, were all instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . … of plant components and a key barrier when breaking down biomass. He was also senior author on a study which …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … larger organisms such as whales, penguins, and seals. “The biomass of krill at least equals the biomass of all humans on the planet,” said Mock. “This gives …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of … sugarcane into production factories for sugar and biomass. Additionally, the team was able to identify a major …
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