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… Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how ecosystems are adapting to stresses. A total of 17 proposals have been approved through the annual … collaboration that produced the reference genome sequence for Eucalyptus grandis. Accessing recently burned …

… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects of research questions Another intern summer has closed at … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …

… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …

… Science Altiarchaea are carbon-fixing microbes and targets of multiple viruses in Earth’s deep subsurface. They are … at virus infections. Their genomes include short DNA sequences that code for CRISPR systems, which help bacteria … resist foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these …

… chemical factories. They hold genetic blueprints for dozens of complex compounds, but stay largely dormant under … bioproducts. This study offers a template — integrative analysis of multiple omics data from various environments — … The team also identified previously unknown promoter sequences within these gene clusters, offering new …

… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons for wishing to … aims to help overcome common user bottlenecks in access, analysis and sharing of JGI-generated data. She is also …

…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the … metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the …

… Metabolism   Although there are still a large number of secondary metabolites yet to be discovered and their … expressing a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE …

… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … play a critical role in the global carbon cycle, and are of significant interest for their potential contributions to … as an energy source.  Until recently, our understanding of these methanogenic microorganisms was narrowed to a type …

… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … own food and generate oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… In   April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25.  On March … at Lawrence Berkeley National Laboratory, is located in one of those counties. The shelter-in-place order has since been … In this brief captioned video, JGI Chief Informatics Officer Kjiersten Fagnan reflects on the personal and …

… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … to living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  Susannah Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of …