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New and Improved: Eucalyptus Reference is Now Accessible
… a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with … using advanced technologies to reconstruct the complete sequences of individual chromosomes. The team describes the … hypothesizes the difference might not be due to repeated sequences, but rather the more accurate assembly of regions …
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JGI-KBase Panel at SACNAS
… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Integrating Experimentation with Data
… The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to … Click to view a downloadable copy of the sponsor prospectus … Keynote Speakers Jim Collins Massachusetts Institute of Technology Kristala Prather Massachusetts Institute of …
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VEGA Symposium
… campus. Organized every two years since 2018, the goal of this symposium is to bring together a “Viral Ecogenomics” … uncultivated viral diversity, understand the role of viruses in natural ecosystems, and functionally explore … be held on Nov. 18 in the Tilden room and open-air patio of the same building.  The symposium will include a mix of …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects of research questions Another intern summer has closed at … and Identification of Mitochondrial Plasmids from DNA Sequence Moitrish Majumdar Mentors: Bikash Shrestha, Crysten …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … through the 1000 Fungal Genomes Project, including 55 newly-sequenced species.  The Impact The class  Dothideomycetes …
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Access to Rock Star Scientists
… their work delivered during the 5th anniversary celebration of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has … about the big stuff, well, the little stuff! People hold office hours and you can pop in and ask them questions about …
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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National User Facilities into their … as needed), and the work plan is written into a Statement of Work document. …
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Nigel Mouncey
… the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … focused on the discovery, development and commercialization of novel production organisms and fermentation processes for … on secondary metabolites. He is also on the Leadership Team of the National Microbiome Data Collaborative and served as …
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JGI-TMF Critical Minerals and Materials Call
… for researchers to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry … challenges in the sourcing, recovery, and utilization of critical minerals and materials. For accepted proposals, … will be provided for free to the PI by the Department of Energy’s funding of the JGI. There is no cost to the user …
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A Complex Confection Decoded: Sugarcane Reference Genome
… most harvested crop by tonnage, sugarcane accounts for 80% of global sugar production. A reference genome for the … by an international consortium. With the genetic code of sugarcane, researchers were able to map the location of … Community Science Program; in 2018, a monoploid reference sequence of sugarcane was published as a step forward in …
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