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Partnerships Development Team
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Workforce Development & Education Outreach
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Complete genome sequence of Thioalkalivibrio sp. K90mix
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Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications
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Learning to Look
… and a unique chronic infection cycle. “We’re not sure why we systematically manage to miss them; maybe it’s due to … first worked on a reference dataset that included genome sequences known to be affiliated with the Inoviridae. “What … should be classified as an order of viruses, with six families. Additionally, the team uncovered a range of …
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JGI@25: Strengthening Soybean
… impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both … of seed oils as biofuel. After analyzing the original sequence, Gary Stacey of the University of Missouri said he …
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Accelerating Metagenomics Discoveries with Deep Learning
… of proteins in order to conduct more efficient protein sequence alignments. He also aims to detect structural similarities in proteins that low sequence identity may belie. The technology he’s using is … Deep learning algorithms can vectorize faces… … so, why not proteins?         … The U.S. Department of Energy …
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SIPs with Standards
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2025 NeLLi Symposium
… metabolic and functional capabilities. Take part in the "Sequences to Cultures" Jamboree!  Immediately following the … to develop recommendations for cultivating new Bacteria and Archaea revealed by a recent genome census . Speakers John … Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access novel …
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JGI announces 2023 CSP Functional Genomics awardees
… of gene and genome function.  Below find a list of the six researchers accepted for 2023. Proposals are accepted …
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The Case for Conservation
… with a complex genome . Now, high-quality reference genome sequences of the male and female plants, each representing a … comes from finally having an answer to the question, “Why bother keeping this?” For Stuart McDaniel’s lab at the … Pangea. McDaniel’s lab continues to work on the enigma of why the ancient moss sex chromosomes continue to evolve so …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… a shelter-in-place order for all residents took effect in six San Francisco Bay Area counties. The JGI, located at …
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