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Impact of library preparation protocols and template quantity on the metagenomic reconstruction of a mock microbial community
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Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil
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Serpentinization-Influenced Groundwater Harbors Extremely Low Diversity Microbial Communities Adapted to High pH
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Shotgun metagenomic analysis of microbial communities from the Loxahatchee nature preserve in the Florida Everglades
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Marine DNA methylation patterns are associated with microbial community composition and inform virus-host dynamics
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A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities
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Large differences in potential denitrification and sediment microbial communities across the Laurentian great lakes
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Protocols
Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … the JGI and Bigelow Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. … of the tree of life. Used in tandem over the years, metagenomics and single cell genomics have afforded JGI users …
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Natural Prodcast Episode 20: Brian Bachmann
… of thought with that. So some people are interested in cave microbial– people are interested in the more extreme … in the cave project just now switching from intermicrobial interactions, studying intermicrobial interactions … by chemical synthesis and make analogs in combination of mutagenesis and direct evolution. Yeah. DAN UDWARY: So it’s …
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A Community Resource for Secondary Metabolite Researchers
… a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed … Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. … U.S. Department of …
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