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JGI Scientists Pen Genome Watch Articles
… Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, are sharing their expertise in … was triggered by a talk. Woyke was invited to present her work in London in December 2018 at a Symposium at the Royal …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in … of multiple Department of Energy Office of Science National User Facilities into their research. In recognition of the increasingly collaborative and multidisciplinary …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a leadership role in providing genome science capabilities to support BER's mission of achieving a predictive understanding of complex …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in …
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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical minerals and materials, inter-organismal interactions, and predictive biology, modeling and biodesign — … instructions via email.   Human or animal disease-related work will NOT be considered under this program. Plant …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The Science … researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … carbon cycling in diverse environments. In addition, this work reflects a collaboration between two programs within …
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JGI@25: Roots of a Mutualist Relationship
… In honor of the JGI's 25th anniversary in 2022, we have … energy and environmental challenges. In March 2008, the genome sequence of the forest fungus Laccaria bicolor was … perspective, involving more multidisciplinary teams. The work also paved the way for a longstanding collaboration …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a close look … Oak Ridge Leadership Computing Facility and Exabiome — worked to offer researchers high-powered tools for … to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new reference … of eucalypts as woody biomass crops for the bioeconomy. The work contributes to the efforts of the  U.S. Department of … Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE Office …
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Better Genome Editing for Bioenergy
… technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput … problem: at a genetic level, how does  Y. lipolytica work? The project was a multi-institutional effort led by … included researchers at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing … decoded the genome of an oil-producing green alga, and demonstrated precise gene targeting in the genome in the … function as a self-sufficient biotechnology. Overall, this work supports the mission of the Department of Energy (DOE) …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… Genome annotations of two C. citriodora subspecies broaden understanding of … assembly of two Corymbia citriodora subspecies variegata genomes allowed researchers to study the conservation and … by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to establish …
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