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… Trained on environmental data, a new JGI tool more accurately facilitates microbial … genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … — ultimately assembling over 220 Tb of sequences and obtaining 700 Gb of assemblies. The team skipped the binning …

… July edition of the journal G3 Genes | Genomes | Genetics , with significant advances compared to the 2014 Eucalyptus … segments. This allows for more accurate and detailed comparative genomic analyses.   The Impact There are 900 species of … Myburg, Wegrzyn, Borevitz) conducted by the US Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 …

… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … ecosystem,” said Salamov, one of Wint’s mentors and a data scientist at the JGI. Previous studies were conducted … to learning about how to navigate and analyze large genomic datasets during the internship, Wint also began …

… the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome … under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and … forwarded to  Gene Report:  Potri.006G034600 on v13 ) Gene Family pages are treated differently, because the active …

… all five cotton lineages and of cotton D are available for comparative analysis on JGI’s plant data portal  Phytozome , which is a community repository and … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …

… genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes … fungal lifestyles of saprobes and pathogens based on the data provided. In this proof of concept test, the team …

… The Department of Energy's Computational Science Graduate Fellowship (DOE CSGF) program … growing need for science and technology professionals with advanced computer skills. During the summer of 2016, …

… harness the traits that let this biomass powerhouse thrive. Within its genome, Sorghum bicolor holds keys to drought and … with resequencing of 1,984 cultivars and landraces, these data capture the diversity of this crop across geographic … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …

… pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  … or DRI for short.  A kaleidoscope of structure-function data To study DRI experimentally, Blaby-Haas, Grosjean and …