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JGI Portals
… upgrades . We regret any inconvenience. Effective July 27, 2026, the JGI will move to a new login service, requiring the … Portal was replaced with the Data Portal and sunset in 2026. The Genome Portal was designed to provide unified … and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace …
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Biodesign
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… giant. The genomes of giant viruses are on the order of 100 times the size of what has typically been associated … viruses, while the genomes of large viruses may be only 10 times larger. And yet, while they are found everywhere, … 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a Common …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… PacBio? A(nswer):  Regular PacBio typically requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., … Does JGI offer long-read metatranscriptome? (for e.g. full 16S, RNA virus, etc) A:  Long-read metatranscriptome / RNA …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … Los Alamos National Lab researchers investigated Chromosome 16, which contains about 3% of the human genome. They wanted … of human chromosome 19 . Nature. 428, 529–535 (2004). doi:10.1038/nature02399 Schmutz, J., Martin, J., Terry, A. et …
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Secondary Metabolites Program
… Development of cell-free based expression platforms: Only 10-20% of BGCs are expressed under standard laboratory …
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When “The Blob” Made It Hotter Under the Water
… which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than 270 water … events such as The Blob is difficult, but critical. By 2016, the microbial populations had begun to recover from the … of the U.S. Department of Energy under Contract DE-AC02- 05CH11231, the G. Unger Vetlesen and Ambrose Monell …
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FICUS
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Examples: Successful LOIs & Submissions
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Leo Baumgart
… flowering plant gene regulation." Nature Plants 11, no. 8 (2025): 1514-1527. Lax, Carlos, Stephen J. Mondo, José F. … fungus Rhizopus microsporus." Nature Communications 16, no. 1 (2025): 3843. McCahill, Ian W., Logayn T. Abushal, … embryo and root development." Plant Communications 6, no. 10 (2025). Kruse, Colin PS, Sara Calhoun, Bishoy Kamel, …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help … data from 27 different poplar ( Populus trichocarpa ) trees, as well as the soil surrounding their roots (known as …
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Jeremy Schmutz
… co-led the team that finished the DOE human chromosomes 5, 16, and 19. Following the completion of the Human Genome … Healey, A.L., Garsmeur, O., Lovell, J.T. et al.  2024.The complex polyploid genome architecture of sugarcane. Nature 628, 804–810. Sreedasyam, A., Plott, C., MdS Hossain, J. T., Lovell, …
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