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An RNA ligase partner for the prokaryotic protein-only RNase P: insights into the functional diversity of RNase P from genome mining
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has brought … of our long term efforts to contribute towards a diverse workforce and scientific community (working with the JGI) as well as our efforts in workforce development. We have a number of initiatives across several …
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Development and characterization of a thermophilic, lignin degrading microbiota
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Boosting Small Molecule Production in Super “Soup”
… to keep processes running smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by … and so one of the things that I think is so special about this collaboration is that we’re doing work in yeast, … result of the collaboration with the JGI, where they are partnering with  Yasuo Yoshikuni and  Ian Blaby of the  DNA …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive … trees are incorrect or need to be changed, please contact us and we’ll work work it out 2.  Q(uestion): Do you publish … not sequenced by JGI, if PIs are interested are working with us please contact me at [email protected] 5.  Q: If …
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Leo Baumgart
… sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. … cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method development. …
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A More Intuitive Phytozome Interface
… interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  … upwards of 250 plant genomes and has been under active development for over 5 years, provides users with the genome … v13. Below are some answers to Frequently Asked Questions about the transition from Phytozome v12 to v13. Why is it …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a … Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … Alternate Metabolic Pathways And there is something special about these new lineages recently tied to methanogenesis. …
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An Enzyme System to Help Catalyze Bioproduction of Plastic
… reductase system, researchers could open avenues for using bacteria to produce ethylene and more.  Microbes excel … exciting project — we were able to extend our capabilities, partnering with Brookhaven National Lab and NSLS-II to … contexts.  “That allows us now to really start thinking about the structure-function relationship. What could we do, …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … genomes and directly link functional information with individual cells. Research Team    … microbiome activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and …
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Development of a thermophilic coculture for corn fiber conversion to ethanol
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2024 Progress Report
… in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … April 2024 — through serving an increased number of users with a record output of products, making data easier to …
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