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… are encouraged to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while samples that are of insufficient quality or quantity will …

… on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … is always associated with toxicity, basically, killing cells. ALISON: Right, because they’re so reactive. BEN: … DAN: Yeah, I don’t think your lab is gonna tackle that single handedly, right? So, yeah, getting the community …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including single-cell and spatial transcriptomics barcode-based …

… are encouraged to review the JGI’s sample requirements . Samples that are not available in a timely manner will delay processing, while samples that are of insufficient quality or quantity will …

… required documentation here .  … You can request a JGI Single Sign On account at https://signon.jgi.doe.gov . This … detailing the quantity and quality requirements for samples submitted to the JGI can be found in our HERE (TK) … ) Metagenomes and Single Cells: IMG/M   (citation: …

… community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … the Letter of Intent; rather proposals are submitted in a single step. … The researcher then submits a proposal for …

… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential … types) (Nature Communications 2017, Science 2018, Molecular Cell 2019) and massive reconstruction of genomes from … Bowers RM, et al. (2017) Minimum information about a single amplified genome (MISAG) and a metagenome-assembled …

… streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s … environments. There’s some marine. There’s some soil samples. There’s human gut samples. There’s lots and lots …

… and ecosystems at the molecular level. Integrating genomics with metabolomics fuels the discovery  of novel … from a wide range of biological and environmental samples — including microbes, fungi, plants and soils. … gene expression, providing deeper insights into functional genomics. A key focus is understanding the interactions …

… quantities of DNA derived from individual environmental cells. The proof of principle study built off earlier … and finished genome derived from an uncultured bacterial single cell – a symbiont of the green sharpshooter. In 2012, … in carbon fixation in the dark ocean. Combining single cell genomics and synthetic biology, a team studying microbial …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We … to advancing the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was painted by Berkeley-based artist Nigel …

… such as quantitative stable isotope probing (qSIP)-metagenomics and metatranscriptomics, to metagenomics and metabolomics data, shedding light on microbial … analysis of viral genome fragments derived from metagenomic samples … IMG/PR serves as a community plasmid resource, …