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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … genome mining over the years, and we talk about a new publication out of JGI in Nature Biotechnology , for which …
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JGI-TMF Critical Minerals and Materials Call
… The joint Critical Minerals and Materials call represents a unique opportunity … provides customized analysis, the JGI also participates in publication of results. Go here for a video and Q&A with … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and …
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New Lineages of Life Group
… bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to identify new divergent lineages and expand … Exploring the fascinating world of giant viruses, which challenge …
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FICUS
… The Facilities Integrating Collaborations for User Science (FICUS) call represents … and expertise of multiple DOE National User Facilities in one research proposal.  Successful applications will … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 9: Roger Linington
… of Natural Prodcast. This week, Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, … Yeah, so we do have an ongoing effort to try and capture reassignments, and many of those come from efforts with … time to be a natural product scientist. It’s, it’s like the Wild West, it’s really great. DAN:  What do you think about …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable … provides customized analysis, the JGI also participates in publication of results. … review by JGI staff as well as staff at the other participating facilities, who consider technical feasibility and …
Learn more
Natural Prodcast Episode 23: Aaron Puri
… for another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on my self-imposed schedule. So, we’ll have to see if I’m going to slip a day on releasing it into the feeds, but I’m …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been …
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Natural Prodcast Episode 2: The Primer, Part 2
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about … of a really blown up colony of Streptomyces.  ALISON: It’s wild. It kind of looks like a sock puppet of a Yeti with a … This the second episode of Natural Prodcast, which continues a conversation from the first episode . You can go to …
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Institutional User Agreements
… starts with a User Agreement — before any work can begin, including the submission of samples for sequencing, or the … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … the Contracts Officer will send required paperwork to your institution. (Samples of the JGI User Agreement , JGI User …
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Natural Prodcast Episode 20: Brian Bachmann
… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … cluster per week. And that really got me excited. And I stopped thinking about doing a postdoc and went to industry … really got me interested in doing synthesis. But I couldn’t stop thinking, well, these organisms are making these …
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Natural Prodcast Episode 11: Marnix Medema
… Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about … effort. Then we can do something together. Dan Udwary: So stop planning and just do it. Marnix Medema: Yeah, well it … In this episode, Alison and I talk to Marnix Medema, from …
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