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Mission
JGI Mission As a U.S. Department of Energy Office of Science … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a DOE Office of Science User Facility at Lawrence … program in the DOE’s Office of Science. In December 2019, the JGI relocated to the newly-built Integrative …
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Publications
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Environmental Genomics Group
Clum, A. et al. (2021)  DOE JGI metagenome workflow … Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. (2019)  Spatial, Temporal, and Phylogenetic Scales of … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …
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FICUS
… be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … All data is made publicly available in accordance with  JGI’s Data Policy . In cases where the JGI provides customized analysis, the JGI also participates …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog … Microbiomes” paper is here . Read the associated JGI news release here . Software we discussed, used for genome …
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Natural Prodcast Episode 22: Alison Narayan
… niche in chemical enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical … And enjoy this conversation with Alison Narayan. JACKIE WINTER: Well, Welcome, everyone. It is my pleasure to … of flavin independent monooxygenases with the help of JGI’s DNA synthesis grant. And that having a whole panel of …
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Partnerships: Adopt-A-Genome
… a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation … of microbial genomes that have been sequenced by the JGI though not formally analyzed or published.  The purpose … Microbiol Resour Announc.  … Objectives … What is IMG/M … Publications … Access to the microbial genomes and …
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Single Cell Research Group
… through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh K. H., … … Research Interests … Former Lab Members … Selected Publications … For further details, please reach out to the …
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Data Policy
… the US Department of Energy (DOE) Joint Genome Institute (JGI) are subject to the following Data Policy. It is our … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … were generated who wish to include use-restricted data in publications, or who wish to redistribute data in any way …
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Institutional User Agreements
… must have their home/employing institution sign a JGI Non-Proprietary User Agreement and Appendix. An Appendix … for the signing official. User Institutions with an active JGI User Agreement older than January 2024 will be required … required paperwork to your institution. (Samples of the JGI User Agreement , JGI User Agreement for Federal Agencies …
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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … never forced it on me, but we always had these scientific news magazines lying around at home. And I would just pick … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 4: Nancy Keller
… conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and … might be in these things we called sclerotia, which are overwintering bodies. So the complexity appealed to me. Also, I … actually, everything is funding, right, isn’t it? I thank JGI for sequencing a lot of fungi. But the thing with them – …
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