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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global nutrient cycling, however they do so under … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these … Multiomics approaches such as metagenomics and metatranscriptomics …
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Special Initiatives & Programs
… Overview The JGI provides sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … The JGI is inviting researchers using the U.S. Culture Collection Network (USCCN) to …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. … photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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CalTeach
… CalTeach is a program for undergraduate majors interested in developing a deep understanding of STEM teaching & learning. Their … Past projects …   Internship Snapshots   …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed with some of …
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Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint … in the project by watching Amanda Hurley’s presentation from the 2019 JGI Genomics of Energy & Environment Meeting.] … sampling which we would look at different particles in the ocean and look at the micro organisms on those particles, as …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science Altiarchaea are … foreign genetic elements by incorporating short sequences from infecting viruses and phages. In these sequences are … This work received funding by the Alfred P. Sloan foundation (grant number G-2017-9955), the …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy … genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find … especially for these primer episodes, if you want to dive deeper on all this at http://naturalprodcast.com . And then …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint … maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … thought that combinatorial chemistry, learning some of the lessons from natural products, in terms of what kinds of …
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Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill
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Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy … prefers to be known among friends in natural products. He’s from Langebio in Irapuato, Mexico, and an incredibly bright … behind these stories, because what we want to learn are lessons that can be translated into applications, not the …
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