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… last two years or so. SMC is now released and ready for the public to tear it up. I’m super excited about this thing, … gave you a little introduction during my intro part of the first one that you were on. But that’s not nearly enough. … Clusters. And at the time, it was a really good resource for secondary metabolism BGCs at a time when it was …

… welcome, Nadine. ALISON TAKEMURA: What is the big picture for you in your lab? NADINE ZIEMERT: Big picture, I want to … with the computer work, right? Which I had to get into first, and the standing trees. And he had this whole idea of … Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … analysis, visualization and interpretation using public datasets.  …

… more than 2,500 users that predominately come from the public sector: academic and government institutions — with … Laboratories, and User Facilities — as well as their resources. It will identify high-value partnerships among … and curated data to support AI applications. In an effort to lead AI-driven genomic innovation to advance …

… uncertain whether that meeting was going to happen in the first place. And yet everything got canceled due to the … whoever wants to contribute. And make this an open resource that is owned by the community. And then I … data on something you’ve published and you put it in a public database, people are able to find your gene cluster …

… of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse … products At JGI, in-depth molecular profiles are generated for metabolites extracted from a variety of experimental … details on the instrumentation we use and our methodology for metabolite analyses.  …

… if you ended up here somehow without having listened to the first part, you might be a little lost, and I’d suggest you … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … is usually one of the, you know, important environmental [resources] that plants need to grow. And so, yeah, so these …

… back for our second season of Natural Prodcast. This first episode up is another primer episode. These are … find transcripts and show notes with links to lots of other resources, especially for these primer episodes, if you want … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… genomics with metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, environmental sustainability, …

… Mexico, and an incredibly bright guy who’s been thinking for a long time about the evolution and natural products … Barona-Gomez. And so he is here to, at least, talk to us, first about my definitions of things and why I am wrong, and … farms from other fungus that want to take advantage of that resource. So in those type of situations, what we would like …

… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and … interactions, evolution, and adaptation, ultimately informing strategies for environmental monitoring, …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, … episodes. This IS the third part, so if this is the first episode you’re checking out, you probably want to go … it’s a little hard to find in print, but we live in the information age and the ebook version is available at most …