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… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … episode is our conversation with Nancy Keller, a fantastic fungal natural products researcher from the University of … conference, which took place a few weeks ago, in January of 2020. So, you might hear us referencing a conference, and …

Undergraduate Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching labs. The purpose of the program is … and data analyses compile original data for improving fungal genomic resources empower students through isolation …

… said Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … focus area was inter-organismal interactions, and two fungal proposals focus on symbiotic relationships. Jessie … bacteria with symbiotic relationships in plant roots of legume crops such as soybeans and peas. Their …

… work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of Energy Joint Genome Institute, builds upon thousands of microbial genomes that have been sequenced by the JGI …

See below for a list of Frequently Asked Questions about our proposal submission … in. All proposals must be written in English. … The CSP and FICUS calls are open to both domestic and … Agreement must be signed before work can begin, and all CSP proposals are subject to JGI policies on Data Release …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … resistance. Cell . 184(13):3376-3393 Almeida A, et al. (2020) A unified catalog of 204,938 reference genomes from … Nature Biotechnol.  39(1):105-114. Schulz F, et al. (2020) Giant virus diversity and host interactions through …

DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … it has a really interesting biosynthetic pathway because fungal genes are cool. And if you like fungal genes, you … Catalog of Earth’s Microbiomes. Nature  Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6) The GEM catalog …

In honor of the JGI's 25th anniversary in 2022, we have revisited a … help solve energy and environmental challenges. Maximizing soybean yield is critical to energy independence in the U.S. … … 3 P. pachyrhizi genomes on MycoCosm … Plant Datasets … Fungal Datasets …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … Frankia . And so the Frankia are bacteria that live in the root nodules of plants. And these guys were sequenced, and … of weird growths on livestock due to you know, bacterial or fungal infections. Yeah, okay. So he identified these things …

Natural Products conference, which took place last January 2020 in San Diego. San Diego, of course, is the “home turf” … right from the beginning, I always wanted to be true to my roots, and always work with marine systems because that’s … JGI projects over the years starting with, you know, the CSP that we did and then leading up to today to some …

… develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. Vyshenska, Dariia et al. (2023)  A standardized … Catalog of Earth’s Microbiomes .  Nature Biotechnology . 2020 Nov 9. doi: 10.1038/s41587-020-0718-6. Ladau, J. et al. …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … of a plant, so the bacteria living on and inside the roots are protecting the plants against pathogens. So usually fungal or oomycete pathogens. In this case they worked on a …