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How to Submit Sequencing Samples
… needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing sample-level reports and tracking statuses.  Please follow the steps outlined below. Click the drop-downs to learn more about each step in the process. If you have any questions, …
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Publication Policy
The JGI has a strong interest in seeing that the data produced … by the facility result in scientific publications. JGI users and collaborators have the right to produce … in full, including all auspice statements. … Read more about our data management practices and the resources we …
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Natural Prodcast Episode 18: A CSP Primer
… with my co-host Alison Takemura, who’s moved on from JGI to do real journalism, and we wish her all the best. … more free-form, and this is the longer cut of the discussions you may have hear over there, with a few more … science facility”, and so today what you’re going to hear about are some more of the details around that. …
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Who We Are
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … National Microbiome Data Collective.        … Learn more about our work at the JGI:  …
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Frequently Asked Questions: Project Management
… products categorized by Science Program.  … The majority of JGI projects come from the user community. Find out about JGI’s calls for proposals , and submit your proposal …
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Single Cell Research Group
Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic … the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). Woyke T ., Doud D. F. R., Schulz F. The trajectory of … J. F., Hugenholtz P., Woyke T . Minimum information about a single amplified genome (MISAG) and a …
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FICUS
The Facilities Integrating Collaborations for User Science (FICUS) call represents a unique opportunity … be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds. … Pennacchio, Project Management Office. For questions about the appropriateness of projects or experimental …
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New Lineages of Life Group
Our research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics … binning of a giant virus. mSystems. 5 (3) Schulz et al. (2018) Hidden diversity of soil giant viruses. Nature …
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Natural Prodcast Episode 10: A Primer on Genome Mining
Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the science and scientists of … my area of expertise, which is genome mining. You’ll hear us talk about what it is, hear me make a pained analogy to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do …
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Natural Prodcast Episode 15: Katherine Duncan
So we’ve got Kate here today, and we wanted to talk to her about a whole list of things. So we have a Scripps … and we want to talk about molecular networking, because I really enjoyed the review that you wrote with Marnix … in Antarctica on a ship. Yeah, so I went to Antarctica in 2018 as a participant in Homeward Bound 2, last year as …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … for the US Department of Energy Joint Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists of secondary metabolism.  … first genome sequence with you. Brad: That’s right,  Dan: JGI did it in fact. Brad: That was a magical project I …
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