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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … data, DNA synthesized, and any other contributions, such as assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …

DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … in synthetic biology by synthesizing genes, pathways, and whole chromosomes for bioenergy and bioproduct applications. … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and …

… on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) 256/404 Fungal Standard …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … Resource Announcements. 2023 12 (10), e00548-23 Whole genome sequence of the denitrifying thermophile …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … … are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an …

… any work can begin, including the submission of samples for sequencing, or the submission of sequencing data for … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is … and delays on the work. The transfer of a proposal from one commercial institution to a new commercial …

The Joint Genome Institute's DNA Synthesis Platform capabilities … This is done by synthesizing genes, pathways, and whole chromosomes for bioenergy, nutrient cycling and … : a user science group dedicated to user project design, assembly, and quality control Strain Engineering Group : a …

The Metagenome Program uses advanced sequencing technologies to … is to develop a deeper understanding of microbial community assembly and microbial interactions, including … regulation, and noncoding RNAs in microbiomes. The insights from this work have the potential to drive innovations in …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and … technologies has allowed the JGI to increase sequencing output while significantly lowering costs. Staff process …

… of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … QC Protocol DNA Extraction 101 : tips, kits, and protocols (from PacBio) Guidance for sample collection and storage … Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … it was a biosynthetic pathway, then you would sequence the whole thing, and you’d use that to then seek out the other …