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Publication Policy
The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the …
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Publications
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Remarkably coherent population structure for a dominant Antarctic Chlorobium species
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Natural Prodcast Episode 7: Ben Shen
… a class of natural product with a really cool chemical structure. We try to explain it, but it’s chemistry, so I … that have been FDA approved over the past two decades, and, remarkably, of the six, two of them utilize the enediyne as … one end of the double bonded carbons. This is hard to say coherently, and harder to type, so here’s a drawing. On its …
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Plant Program
With collaborative user projects, the JGI’s Plant Program delves into … to environmental changes. The program lays the groundwork for sustainable solutions to current problems facing … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … so no programming knowledge and no dedicated compute infrastructure is required to perform computational analysis. …
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FICUS
The Facilities Integrating Collaborations for User Science … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …
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Natural Prodcast Episode 15: Katherine Duncan
I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … of natural products from invertebrates, mostly. Dan Udwary: Structure elucidation, yeah. Kate Duncan: Right, yeah, so … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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New Lineages of Life Group
… to find novel functions that may impact microbiome structure and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …
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Mission
JGI Mission As a U.S. Department of Energy Office of Science user … and resources. Our vision is to lead genomic innovation for a sustainable bioeconomy. ALL PROPOSALS must support the … earth, and environmental systems for energy and infrastructure security. The BER research program seeks to …
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Natural Prodcast Episode 23: Aaron Puri
… … DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … “tail of the acyl homoserine lactone” can have different structures, and that is akin to what you’re referring to … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … a community effort of putting together the natural product structures that are known. I forget how many structures are … that are no longer needed would end up being purged from populations. And that would go for chemistries as well. DAN …
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