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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …

UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find transcripts and show notes … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

The Metagenome Program uses advanced sequencing technologies to … The JGI supports microbiome data science by enabling comparative genomics and metagenomics analysis through the … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

… driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … single-cell sequencing, resequencing, RNA sequencing and epigenomics. Expansion of sequence space:  The JGI generates … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …

The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical … the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on discovering and … … The IMG/M system serves as a community resource for comparative analysis and annotation of all publicly …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and … provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …

Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … communities and ecosystem function.  The Environmental Genomics group also hosts the Viral Genomics group . … Microbiology , 15032. 10.1038/nmicrobiol.2015.32 … Selected Publications … For further details, please reach out to the …

… constraints exerted by viruses. Research in the viral genomics group aims at improving our collective … al. (2019) Minimum Information about an Uncultivated Virus Genome (MIUViG).  Nature Biotech .  37 , 29–37 Roux S, et … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …

The IMG group owns and maintains integral components of JGI’s production workflow, and is responsible for the … data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team    … The … of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates …