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Publication Policy
… research project are appropriately recognized and credited for their work, while also adhering to the authorship … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts …
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Microbial Program
… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …
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Publications
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Microbiome Data Science Team
… analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major … The research efforts of the group have concentrated in demonstrating the … research.  These efforts include exploration of the global diversity of alternative genetic codes (Science 2014), …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial …
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Plant Microbial Interactions Group
… Plants are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all … how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …
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New Lineages of Life Group
… insights into viral evolution and complexity, and encode for a treasure trove full of novel genes ready to be tapped for downstream applications. … Cataloging Earth's microbial lineages through advanced genomic techniques and … reveal new lineages and functional capabilities in the microbial world. …
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Metagenome Program
… genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … Yeah, bacteria sound like a good place, to me, to look for diversity because there are so many bacteria, because it is … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial …
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Mission
… vision is to lead AI-driven genomic innovation to advance biotechnology.   … and AI-driven analyses that convert biological information into actionable insights and solutions. … crops, enhance biomass conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and …
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Viral Genomics Group
… parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved … is still limited. One key challenge is to complement diversity surveys ( Who is there? ) with activity …
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