Search

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … data science.  Research in the Kyrpides group focuses on Microbiome Data Science and analysis of Big Data. The … The research efforts of the group have concentrated in demonstrating the power of …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond exploring and … drive innovations that could advance our understanding of Earth’s ecosystems. …

… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire … The DNA Synthesis Program plays a central role in advancing … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … below) for the generation of sequence or metabolomic data, DNA synthesized, and any other contributions, such as …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …

… however they do so under strong constraints exerted by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … involves both experimental and computational exploration of uncultivated viral diversity, characterization of …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing … with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them …

… — before any work can begin, including the submission of samples for sequencing, or the submission of sequencing … rights in technical data, project reporting to the DOE, and publication requirements. An official with authority is …  The recent updates were approved by the DOE to address the DNA Synthesis program. When fully executed, the new User …

… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE is an … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … or MAGs. So these are genomes that were assembled from metagenomic sequence, metagenomic sequence being taking a …