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… program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … up-to-speed with some of the latest developments in microbial genomics, metagenomics, and computational biology, …

… computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial lineages, and reconstruct metabolic properties … to a better understanding of microbial communities and ecosystem function.  The Environmental Genomics group also …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the responsibility for leading the efforts … facility, provided this is done in a timely fashion. The publications resulting from such efforts should specify the …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, … provides high-quality, large-scale genomic data to advance microbial research that drives sustainable solutions in energy, agriculture and ecosystem management. … The Microbial Program focuses on using advanced sequencing …

… Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … genetic elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses … approaches to assess microbial activity across ecosystems.  By studying microbial communities and their …

… have yielded numerous, high-quality outputs, such as data, publications and software. The JGI supports the entire data … and connect our data to the broader biological data ecosystem. Our community of data-downloading users spans tens …

… works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular level. Integrating genomics with … exploration of energy and nutrient exchange, as well as microbial and plant responses to environmental changes. With …

… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … between microbes and eukaryotes and their impact on ecosystem function: We investigate the intricate networks of … hosts. Our work reveals how these interactions shape ecosystem function, genomic innovation and environmental …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … of the IMG data portal , which is a larger portal for microbial genomics. IMG stands for Integrated Microbial Genomics. It’s one of the big data …

… including fungal and bacterial symbionts, detrimental microbial pathogens, and associated viruses that all contribute to a dynamic ecosystem. We are interested in how plants self-organize, influence, and are influenced by microbial partners. We use a variety of genomics-powered …

… Microbes drive critical ecosystem functions and affect global nutrient cycling, however … parameters driving virus:host dynamics in environmental microbial communities. This involves both experimental and … host cell take-over by viruses, and attempts to evaluate ecosystem-level impacts of viral infections. The Viral Genomics …