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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI … is done in a timely fashion. The publications resulting from such efforts should specify the collaborative nature of …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … talent for biosciences.  Adopt-a-Genome has: ~20 faculty from institutions across the country Efforts in ongoing …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … that govern ecosystem processes. This research provides insights into microbial diversity and metabolic potential, … based on functional traits. These advancements provide new insights into microbial ecosystems.  The Program also aims …

… cycling and inter-organismal interactions. These insights are crucial for addressing key environmental … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … of inter-organismal interactions: In an effort to gain insights into the interactions between microbial organisms …

… discovering and characterizing giant viruses, which possess genomes and particle sizes that rival those of cellular … between viruses and cellular life, providing unique insights into viral evolution and complexity, and encode for … lakes and hyperthermal springs. This research provides insights into the limits of life and potential for life on …

… agricultural productivity. Research spans diverse areas — from understanding how terrestrial plants and phytoplankton … improve the accuracy of functional predictions and speed up genome analysis. Additionally, the Plant Program is … communities affect plant growth and productivity. These insights have the potential to inform strategies that …

… them with genomic data to enhance our understanding of genome science, organisms, and ecosystems at the molecular … microbes, and understanding microbiome interactions. The  insights derived are crucial for advancing the bioeconomy, … cutting-edge metabolomics with genomic data to gain insights into how small molecules function within plants, …

… UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … genome mining on more than 50,000 genomes that we derived from meta-genome sequences. As always, you’ll find … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, …

… such effort is targeted at environmental cells that are from candidate phyla, major branches in the phylogenetic … in the strongly biased representation of sequenced genomes in the public domain, the bulk of which belong to … means to begin filling this gap. A primary goal is to get  insights into the coding potential of candidate phyla  to …

… While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our understanding of the impacts of these viruses … to identify, filter, cluster, annotate, and bin viruses from metagenomes. mSystems 9:e00888-24. … Collect CRISPR spacers from metagenomic reads at scale …