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… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … with a list of JGI staff who contributed to their project, using the CRediT taxonomy ( credit.niso.org/ , with …

… The JGI’s Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … for addressing key environmental challenges, such as improving soil health, carbon sequestration and bioeconomy …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … advances in management, processing and visualization of “big data,” and artificial Intelligent/machine learning … The research efforts of the group have concentrated in demonstrating the power of …

… by viruses. Research in the viral genomics group aims at improving our collective understanding of ecological and evolutionary parameters driving virus:host … and computational exploration of uncultivated viral diversity, characterization of molecular mechanisms involved …

… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Our aim is to more fully capture microbial and viral diversity, leading to a better understanding of microbial …

… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … elements. Beyond exploring and characterizing microbial diversity, work in the Metagenome Program uses several … Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …

… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find … Exploring the fascinating world of giant viruses, which challenge our understanding of viral …

… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … be. That’s still largely homology based, but then you’re using kind of a black box for the rule set. (Like antiSMASH, …

…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing capabilities and products to our users. This … An assay used for profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …

… The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for … and bioproducts. By sequencing and analyzing the genomes of these organisms, the program investigates the … and advanced genomic analysis to explore the rich diversity of fungi and algae. These organisms play a critical role in …