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… to a research project are appropriately recognized and credited for their work, while also adhering to the … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to produce manuscripts for publication and the …

… metabolism pathways. And today, we get to present our conversation with Marnix Medema , from Wageningen University in … of biosynthetic gene clusters. But with all of the other IMG kind of hooks into IMG’s data. IMG being Integrated … so yeah, we use antiSMASH to identify the BGCs that go into ABC. And then more recently, we use it for any kind of …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome Institute, builds upon thousands … biological insights from sequence data, employing IMG data and tools for comparative analysis, visualization …

… in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated … data into microbial genomes, which is of fundamental value to improving our understanding of microbial ecology …

… to help our users. So for those who are familiar with JGI’s IMG data portal , the Integrated Microbial Genomics, there was a subsection of that called ABC, the Atlas of Biosynthetic Clusters. And at the time, it … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … lots and lots of biosynthetic gene clusters. So, in the ABC portal here at JGI, ABC being the Atlas of Biosynthetic Clusters , which is a subsection of the IMG data portal , which is a larger portal for microbial …

… DAN: Hey, everybody. Welcome back for another episode of … now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for me keeping myself on … onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got me into that …

… Usually, in a lot of cases, we still have to go through publications to get proteins, and their functions, and all … but this is a great start. Databases like, I think, JGI’s ABC also has a nice overview of all these different gene … in the past, we’ve had these monolithic databases, NCBI and IMG , that have a lot of data and really useful data, really …

… Berkeley National Laboratory. The JGI consists of 225 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location … non-medical microbes, microbial communities, and other relevant organisms. We provide access to large-scale datasets …

… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , … You can visit the Products & Offerings section of our website for more details, including … calls and proposal submission, as well as examples of approved proposals, please visit the Proposals FAQ .  …

… DAN: Welcome back for episode 9 of Natural Prodcast. This … Alison and I talk to Roger Linington, from Simon Fraser University in British Columbia, Canada. This is the last of the … internally by making a list on the whiteboard of the top 50 journals that we thought were most likely to contain …