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… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, … of these organisms, the program investigates the biological mechanisms that enable fungi and algae to play a vital role … and biogeochemistry. This research helps translate their genomic potential into practical applications, including …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … and integrating various data types to explore the molecular mechanisms behind phenotypic evolution. It also utilizes … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … what the biosynthetic conversions were and what the mechanisms enzymatically were. ALISON TAKEMURA: Where did …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, … The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing critical …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The program provides high-quality, large-scale genomic data to advance microbial research that drives … linking strain-level genetic variation to ecological niche adaptations.  Single cell sequencing approaches are also …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

JGI Mission As a U.S. Department of Energy Office of Science user facility supported by the Biological and Environmental Research program, the Joint Genome Institute provides advanced genomic capabilities, large-scale data and professional …

A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … previous study conducted by our research team surveying the genomic and phenotypic diversity across the natural range of … climate change will provide unprecedented insight into the mechanisms that perennial grasses have and will use to …