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… to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, …

… analysis techniques to explore the vast and diverse world of microbes. Studying bacteria and archaea, including those … The program provides high-quality, large-scale genomic data to advance microbial research that drives … laboratory isolation and genome sequencing of underexplored bacterial and archaeal lineages that are important for …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … learning, because it feeds on so much data, right, to learn features of interest. And so, because that it’s such a fuzzy …

… in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … and biogeochemical cycles. Research Team    … A complete publication list available at Google Scholar. Schulz, C … al. (2016) A Rickettsiales symbiont of amoebae with ancient features. Environmental Microbiology. 18 (8), 2326-2342 …

The Fungal & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental … and biogeochemistry. This research helps translate their genomic potential into practical applications, including …

The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, …

The Plant Program Advisory Committee is chartered to offer advice, guidance and counsel on the effective management and strategic objectives of the plant program. The committee serves as the program's …

Prodcast episode 17. The guest we have this week is Professor Cassandra Quave from Emory University, with joint … a check-up on me. And I wonder how that intersects with bacterial bioprospecting that is often done, where we’re … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as …