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… with other organisms, and adapting to environmental changes. The program lays the groundwork for sustainable … and anti-pest compounds.  The program is working to expand genomic resources for key plant species, enhancing our … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … interpretation of sequence, metabolomics, and functional genomics data types as well as in advanced assembly and … … Any external publication using JGI data that is not associated with a specific JGI proposal , and/or by authors …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … IMG/M … Publications … Access to the microbial genomes and associated resources/tutorials is freely available, and any …

… of microbes. Studying bacteria and archaea, including those associated with microeukaryotes, enhances our understanding of … The program provides high-quality, large-scale genomic data to advance microbial research that drives …

… of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … as well as microbial and plant responses to environmental changes. With advanced mass spectrometry techniques and … service returns a list of scored reaction and gene matches associated with metabolites and a list of scored metabolite …

… and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … streams. This will all become clearer as we get into the genomics. So– ALISON TAKEMURA: I’m just enjoying the ride … archaeal genomes that were created – these are Metagenome Associated Genomes, or MAGs. So these are genomes that were …

… visible and available in JGI systems. Users not involved with the proposal under which the data were generated (e.g. … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … of use-restriction expires. All use-restricted data have an associated date of use-restriction expiration. …

… that harbor a fantastic diversity of cell types and associated organisms, including fungal and bacterial … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… encompasses bacteria, archaea, and micro-eukaryoes, along with their associated viruses and mobile genetic elements. Beyond … Metagenome Program combines large-scale, time-series metagenomic data with detailed characterization of model systems …

I think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff … example, in terms of the stereochemistry, such that single changes can lead to a particular high activity towards a … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… and biogeochemistry. This research helps translate their genomic potential into practical applications, including … carbon management, and environmental sustainability. Fungi, with million species, are essential for ecosystem functioning — particularly in their roles associated with plants (mycorrhizae, endophytes, growth …