Results
… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators and JGI …
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… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …
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The program also collaborates with isolate collections to complete large-scale sequencing projects, including 10,000 … driven prioritization lists for laboratory isolation and genome sequencing of underexplored bacterial and archaeal … resequencing, RNA sequencing and epigenomics. Expansion of sequence space: The JGI generates reference genomes from …
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… sequencing products below. In addition, JGI will submit raw sequence data to SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the MassIVE … Fungal Minimal Draft Lower coverage short-read whole genome shotgun sequencing Assembly, annotation ( Mycocosm ) …
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… data and serving them to users via the Integrated Microbial Genomes & Microbiomes (IMG/M) system. Research Team … The … nearly 18% of all existing species. Additionally, the complete linkage clustering made it possible to confidently … distribution of microbial genome and microbiome datasets sequenced at the JGI. IMG/M is also open to scientists …
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UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … what looked to be novel biosynthetic gene clusters, like completely new things that we haven’t seen before. And so …
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When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …
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Procedure GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected … Project Manager (PM) a list of organism names (or for metagenomes, sample names). Need help naming your organisms? … pipelines. You will receive automated emails as raw sequence data becomes available, and as analysis is …
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The Metagenome Program uses advanced sequencing technologies to … assembly and binning have enabled reconstruction of complete or near-complete population genomes directly from … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …
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… will generate an email that will go to an administrator to complete the process. … Guidelines detailing the quantity … listed on the “info” page for that organism on the Genome Portal . … You can view the status of all public … for individuals associated with your proposal. Find our Publications Policy on our Data Policy & Support page. … …
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