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Publication Policy
… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, and …
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …
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Partnerships: Adopt-A-Genome
… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review process, … A primary purpose of this project is to bring educators from a broad range of …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… proposal call . This represents a unique opportunity for researchers to request the capabilities and expertise of both national user facilities in one research proposal.  Submit research proposals  here that integrate genomics with nanoscale science, accelerating discoveries …
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New Lineages of Life Group
… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and … in environmental sequence data. We use multi-omics (metagenomics, metatranscriptomics, single cell genomics and … to identify new divergent lineages and expand the Tree of Life. We then investigate the coding potential to find …
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Microbiome Data Science Team
… a revolution brought on by rapid developments in genomics and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … analysis and interpretation is creating new opportunities for breakthrough discoveries and catalyzing a major …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by … functional genome annotation, improves understanding of the role small molecules play in diverse biological … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse …
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Environmental Genomics Group
… the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …
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Metabolomics Technology Group
… Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial … networks of environmental microbes and how they transform their environment. Research Team    … For further details, please reach out to the Group Lead …
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Publications
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m … like E. coli , and then being able to look using the metabolomics capabilities also at JGI — it’s really cool … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …
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