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The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, and any other …

… “Adopt a Genome” is an informal program for faculty to … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … genomes claimed (or about one per student) Seven student-drafted articles accepted with over 20 more in draft Efforts …

The JGI has diverse capabilities in: DNA and RNA sequencing, Sample … DNA synthesis and pathway engineering Mass spectrometry based metabolomics Below is a table of standard product … coverage of variants depends on project Fungal Minimal Draft Lower coverage short-read whole genome shotgun …

The JGI’s Microbial Program focuses on using cutting-edge sequencing, … of the microbial product catalog : Beyond minimal draft and improved draft microbial genomes the program … the functional capability of microbial communities based on their metagenome sequence, in the context of …

DAN UDWARY: You’re listening to the Department of Energy … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … families of genes that it searches for and uses a rule-based system that classifies the things that it finds into …

The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of biofuels, … aligning with the DOE's vision for a sustainable, bio-based economy. … Genome to Enzymes and Pathways focuses on …

The Metagenome Program uses advanced sequencing technologies to … pathways, enabling modeling of microbiomes based on functional traits. These advancements provide new … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for … add the characters “.gb” (no quotes, just .gb) to the end of your file name. …

The Sequencing Technologies Group applies cutting edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological …

Data produced and released by the US Department of Energy … PIs or co-PIs) who wish to include use-restricted data in publications, or who wish to redistribute data in any way … and may also be added during the proposal lifecycle based on scientific need. Proposals are considered complete …