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JGI Portals
… The JGI’s data stewardship expertise and infrastructure enable a broad community of scientists and … accessibility are critical requirements for amplifying the JGI’s impact. Data generated from a single investment will … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to …
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Sequencing Technologies & Products
…   Our Sequencing Technologies Group is well-integrated across JGI departments to ensure a robust offering of sequencing … through end-to-end automation — and further advancing sequence applications, single cell genomics, DNA synthesis, … profiling transcription factor binding sites across entire genomes. This technology has been further scaled to a …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… to the California gold rush. And we’ll talk about a new JGI paper that’s just come out where I got the chance to do … a great, fun bunch of little shows lined up, and I’m really looking forward to getting them out to you all. But for now, … getting those things into a tube, and actually, then, even beyond that, having those things do what we were hoping that …
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JGI@25
… Celebrating 25 years of genomics research 2022 marked the JGI’s 25th … energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references dozens of …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … and reconstruct metabolic properties encoded within those genomes. Our aim is to more fully capture microbial and …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished microbial genomes, with the expectation that faculty will work with … A primary purpose of this project is to bring educators from a broad range of disciplines up-to-speed … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …
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Sequencing Submission Requirements for DNA Synthesis
… When submitting sequences to the JGI DNA Synthesis program, please include the following items: … Sequence files for all constructs should be emailed to  … There are several easy-to-use open source tools for converting DNA sequence files into well-formed GenBank files. ApE …
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How to Submit Sequencing Samples
… the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes instructions on accessing … have any questions, please contact your Project Manager or jgi[email protected] . … 1) Review JGI sample QC requirements and protocols Obtaining DNA and …
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JGI Advisory Committees Code of Conduct
… Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley … In working toward a shared vision with members of the JGI advisory committees, we welcome and encourage openness, …
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to advancing the frontiers of …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … with their associated viruses and mobile genetic elements. Beyond exploring and characterizing microbial diversity, … catalog of viral, microbial, and microeukaryote genomes and mobile genetic elements, linked to custom …
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Natural Prodcast Episode 14: Nigel Mouncey
… and head of the Secondary Metabolites Science Program at JGI, and also my boss, Nigel Mouncey. I got him on to talk … .  And that got me back a little bit to redox enzymes and looking at gene regulation. And then from there, I went to … 10,000, 15,000, 20,000 mutants a week. We started doing a whole bunch of strain engineering efforts. We did a lot of …
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