Search

The JGI has a strong interest in seeing that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … acknowledgment (see Auspice Statement below) for the generation of sequence or metabolomic data, DNA synthesized, …

… & Algal Program explores the vast diversity of fungi and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the … on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, …

… growth, provide critical advantages to the organisms producing them, and are often involved in defense, nutrient … conditions, with only a small portion of the biosynthetic gene clusters (BGCs) being expressed. The program works to … pathway analysis, optimization of cell- and cell free-based expression platforms, tools and data for deciphering …

… to regulate Earth's carbon balance, to exploring the genetic basis of how plants have naturally adapted to varied … Centers. The  Plant Gene Atlas initiative develops gene expression catalogs across JGI Plant Flagship … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … while nurturing a fresh cohort of users Reach the next generation of genome scientists and recruit new talent for …

ALISON TAKEMURA: I know that it’s looking in the genome for genetic elements of interest, you know, something like … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … it is that secondary metabolism is ancient and, therefore, widespread. So if secondary metabolism was there when– and …

The focus of this group, in recent years, has been to bring generalizable … with little to no genetic tools enabling heterologous expression and functional exploration.  The developed …

… back to a new session of Natural Prodcast. I’ve got two things I wanted to tell you about in this introduction. First … It was unpublished at that point. But people would push out gene clusters maybe once a month at most. Maybe twice a … if you want– if you really want to, you can do heterologous expression. You can do homologous expression techniques and …

… and he has a project with the JGI to synthesize the genes for and explore the chemistry of quorum sensing … of these or any organisms. So developing good heterologous expression hosts like maybe in many fields now like in … up on previous Natural Prodcast episodes  here . Show Notes Publication: Suo Z et al. A Mesorhizobium japonicum quorum …

Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to … metabolomics fuels the discovery  of novel metabolites, genes, and proteins. It also enables exploration of energy … scientists are able to link metabolic activity with gene expression, providing deeper insights into functional …