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The  Open Green Genomes (OGG) project seeks to develop comparative high quality genomes and annotations across the … on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the … the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

… that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … experience and capabilities in the analysis, annotation, comparative analysis, and interpretation of sequence, metabolomics, and functional genomics data types as well as in …

… into bioenergy and bioproducts. The program’s fungal genomics research explores new metabolic processes and enzymes … … The Mycocosm web portal provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to …

… faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This … program is to: Build curiosity and illustrate the value of comparative genomic analysis Expose students to peer review … employing IMG data and tools for comparative analysis, visualization and interpretation using public datasets.  … …

… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …

… technology advances in management, processing and visualization of “big data,” and artificial … Other projects in the group include the sequencing and comparative analysis of thousands of archaeal and bacterial … Science 344(6186):909-13 … Research Efforts … Selected Publications … For further details, please reach out to the …

The Plant Program Advisory Committee is chartered to offer … on the effective management and strategic objectives of the plant program. The committee serves as the program's …

… … Dan Udwary: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … And he tells us about forthcoming efforts in paired-omics data sets and seeking to interpret function from BGCs. … these gene clusters in your genome and outputs them in the visual HTML file that you can browse. Dan Udwary: Yeah. And …

… almost like a coffee table book so that it was very, very visual, lots of information on how the grandmothers and the … I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … We have sequencing facilities, DNA synthesis, metabolomics. Where do you see the role of a big place like JGI in …

… for researchers to request the capabilities and expertise of multiple DOE National User Facilities in one research … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of … provides customized analysis, the JGI also participates in publication of results. … Proposals for the annual FICUS …