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Publication Policy
… The purpose of this policy is to establish communication norms around … that the data produced by the facility result in scientific publications. JGI users and collaborators have the right to … assembly, analysis, annotation, verification, creation of genome browsers, etc. The users, collaborators, and JGI …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to “claim” the … faculty will work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided … A primary purpose of this project is to bring educators from a broad range of …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … and how we do it here and maybe give an example of a recent publication. ALISON TAKEMURA: Awesome. Yeah, let’s dive in, … lots of stuff. On average, we had something– I think we had two biosynthetic clusters per MAG, which is pretty good …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved … develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which …
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Publications
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DNA Synthesis Program
… The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of entire chromosomes, advancing the development of … project. These advancements contribute to the development of new biofuels and sustainable biochemicals. The DNA …
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Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … I’m interested in the world of natural products is also twofold but for different reasons to learn about how nature … the help of JGI’s DNA synthesis grant. And that having a whole panel of these enzymes allows us to ask the questions …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the … scientific audience whereas now I’m sitting here with two people who know way more about natural products than I … great. Yeah. So, thanks a lot for having me. So, my backgrounds. I started out doing I think what a lot of people …
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Plant Program
… collaborative user projects, the JGI’s Plant Program delves into the natural world’s potential to address global … to current problems facing humanity. A major focus are biofuel feedstock species and plant-microbe interactions, … a plant based bioeconomy where plants are a major source of chemical production and contribute to a healthier planet …
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Natural Prodcast Episode 13: Francisco Barona Goméz
… DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … is what. This is not new. It actually was first proposed by two authors called Firn and Jones. I’m sure that people … feature of many metabolites being produced throughout the whole pathway. And that is what we call secondary …
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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the … Moving forward, I’m hoping to get a new one out every two weeks. This time, we’ve got a great interview with Ben … from their core chemical structure: one “ene” – that’s two carbons attached by a double bond – and to “ynes” – two …
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Metagenome Program
… The Metagenome Program uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … The Metagenome Program focuses on the high-throughput sequencing of microbial communities to uncover the complex interactions …
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